Genome Browser
new CanvasXpress('canvas',
{tracks: [{name: 'Affy Probes',
type: 'box',
connect: true,
fill: 'rgb(255,255,51)',
line: 'rgb(0,0,0)',
data: [{id: '123456_at', dir: 'right', data: [[100,120], [123,132], [141,160]]},
{id: '234567_at', dir: 'left', data: [[181,200], [211,230], [251,270]]},
{id: '345678_at', dir: 'right', data: [[281,300], [311,330], [351,370]]}]},
{hide: true,
type: 'bar',
height: 20,
fill: ['rgb(255,0,0)', 'rgb(0,0,255)', 'rgb(255,255,0)'],
line: ['rgb(255,0,0)', 'rgb(0,0,255)', 'rgb(255,255,0)'],
data: [{id: '123456_at', data: [100,25,35,46]},
{id: '234567_at', data: [181,80,45,10]},
{id: '345678_at', data: [281,65,46,29]}]},
{name: 'Tissue Distribution (Heart, Liver, Kidney)',
hide: false,
type: 'heatmap',
autowidth: true,
height: 20,
line: 'rgb(0,0,0)',
smps: ['Heart', 'Kidney', 'Liver'],
data: [{id: '123456_at', data: [100,25,35,46]},
{id: '234567_at', data: [181,80,45,10]},
{id: '345678_at', data: [281,65,46,29]}]},
{name: 'Ref Seq',
type: 'box',
connect: true,
fill: 'rgb(0,100,0)',
stroke: 'rgb(0,0,0)',
data: [{id: 'NM_012345', dir: 'left', data: [[171,190], [201,220], [241,290]]},
{id: 'NM_567890', dir: 'right', data: [[121,140], [145,156], [168,196]]},
{id: 'NM_987654', dir: 'right', data: [[271,290], [301,320], [341,390]]}]},
{name: 'SNP',
type: 'triangle',
fill: 'rgb(100,0,0)',
line: 'rgb(0,0,0)',
data: [{id: 'SNP123', data: 123},
{id: 'SNP234', data: 145},
{id: 'SNP789', data: 220}]},
{type: 'sequence',
subtype: 'DNA',
hide: true,
line: 'rgb(255,255,255)',
data: [{id: 'SNP123', data: [119,'AGCT[TA]CGAG']},
{id: 'SNP234', data: [141,'ATCG[TG]AATA']},
{id: 'SNP789', data: [216, 'GCCC[CT]AGGG']}]}]},
{graphType: 'Genome',
backgroundType: 'gradient',
backgroundGradient1Color: 'rgb(0,183,217)',
backgroundGradient2Color: 'rgb(4,112,174)',
setMin: 0,
setMax: 500,
showFeatureNameThereshold: 20,
featureWidthDefault: 3,
featureHeightDefault: 8,
featureTypeDefault: 'line',
sequenceAColor: 'rgb(255,255,0)',
sequenceCColor: 'rgb(0,255,255)',
sequenceGColor: 'rgb(0,255,0)',
sequenceTColor: 'rgb(255,0,0)',
sequenceMColor: 'rgb(255,0,255)',
trackNameFontColor: 'rgb(29,34,43)',
featureNameFontColor: 'rgb(29,34,43)',
xAxisTickColor: 'rgb(29,34,43)',
wireColor: 'rgba(29,34,43,0.1)',
periodTicksLabels: 5});