Heatmap Graphs : General parameters for heatmaps

# adjustAspectRatioHeatmapIndicator

Flag to adjust aspect ratio of heatmap indicator. It depends on the adjustAspectRatio parameter; that is, the adjustAspectRatio parameter has to set to true for the adjustAspectRatioHeatmapIndicator to take effect
Type: boolean
Default: true
Used in: Heatmap

# grpIndicesStart

Number that indicates starting point for grouped samples in heatmaps when the canvas is zoom in
Type: integer Private
Default: -1
Used in: Heatmap

# heatmapAutoAdjust

Flag to adjust the range of the heatmaps when zooming in/out
Type: boolean
Default: false
Used in: Heatmap

# heatmapCellBox

Flag to print a box around the heatmap cells
Type: boolean
Default: true
Used in: Heatmap

# heatmapCellBoxColor

Color for the heatmap boxes around the cells
Type: color
Default: rgb(102,102,102)
Used in: Heatmap

# heatmapCellBoxColorHighlight

Color for the highlighted heatmap cells
Type: color
Default: rgb(255,215,0)
Used in: Heatmap

# heatmapCellBoxHighlightWidth

Width for the highlighting heatmap boxes around the cells
Type: float
Default: 1
Used in: Heatmap

# heatmapCellBoxWidth

Width for the heatmap boxes around the cells
Type: float
Default: 1
Used in: Heatmap

# heatmapCollapse

Flag to collapse cells in heatmaps of type circle or hexagon. If true cells are ploted without outline otherwise the outline is the foreground color
Type: boolean
Default: false
Used in: Heatmap

# heatmapIndicatorHeight

Length in pixels for the heatmap indicator
Type: integer
Default: 35
Used in: Heatmap

# heatmapIndicatorHistogram

Flag to show histogram in the heatmap indicator
Type: boolean
Default: false
Used in: Heatmap

# heatmapIndicatorHistogramColor

Color for the heatmap indicator histogram
Type: color
Default: rgb(0,255,255)
Used in: Heatmap

# heatmapIndicatorPosition

Position for the heatmap indicator
Type: string
Default: right
Options: topLeft, top, topRight, right
Used in: Heatmap

# heatmapIndicatorWidth

Length in pixels for the heatmap indicator line width used for increase the size of the indicator
Type: integer
Default: 150
Used in: Heatmap

# heatmapType

Type of Heatmap used to overlay a layer on top of an image. Special for spatial transcriptomics and UpSet plots
Type: string
Default: normal
Options: normal, circle, hexagon, upset
Used in: Heatmap

# isMultidimensionalData

Flag to indicate if there is more than a single data set
Type: boolean Private
Default: false
Used in: Heatmap

# showHeatmapIndicator

Flag to show/hide the heatmap color indicator
Type: boolean
Default: true
Used in: Heatmap

# smpIndicesStart

Number that indicates starting point for samples in heatmaps when the canvas is zoom in
Type: integer Private
Default: -1
Used in: Heatmap

# smpTitleLabelPosition

Position for sample labels
Type: string
Default: left
Options: left, right
Used in: Heatmap

# varIndicesStart

Number that indicates starting point for variables in heatmaps when the canvas is zoom in
Type: integer Private
Default: -1
Used in: Heatmap

# varTitleLabelPosition

Position for variable labels
Type: string
Default: bottom
Options: bottom, top
Used in: Heatmap