Getting Started
Overview
Installation
API
3D Attributes Animations and Visualization Transitions Area Graphs Aspect Ratio, Space and width Axis Bar Graphs Bin Plots Bins Boxplot Graphs Circular Graphs Citations or References Clustering Colors Combination Plots Confidence Intervals Contours Correlation Graphs DOE Data Data Customizer Data Filters Data Point Attributes Data Selection Data Table Data Table/Filter Data sorting Debug Decorations Dendrograms Density Plots Dotplot Graphs Effect Error Bars Events Fish Graphs Fit Lines Foreground and Background Gantt Charts General General Attributes Genome Browser Gradients Heatmap Graphs Hierarchy Histograms Ideograms Images Kaplan Meier Plots Legends Line Graphs Lines Loess Maps Margins Meter Graphs Missing Data Motion Charts Network Algorithm Parameters Network Cola Algorithm Parameters Network Communities Network Graphs Network Node and Edge Attributes Oncoprint Graphs Overlays Pie Charts Plot area Quantile Regression Plots R R-Axis Random Regression Remote Procedures Ridgeline Plots Samples Sankey Diagrams Scatter Plot Matrix Scatter Plots Shadows Shapes Tag Cloud Text Time Series Titles and Subtitles Treemap Graphs Trees UpSet Plots Variables Venn Diagrams X-Axis Y-Axis Z-Axis Zooming, Panning and Resizing cxplot false

Heatmap Graphs : General parameters for heatmaps

# adjustAspectRatioHeatmapIndicator

Flag to adjust aspect ratio of heatmap indicator. It depends on the adjustAspectRatio parameter; that is, the adjustAspectRatio parameter has to set to true for the adjustAspectRatioHeatmapIndicator to take effect
Type: boolean
Default: true
Used in: Heatmap

# grpIndicesStart

Number that indicates starting point for grouped samples in heatmaps when the canvas is zoom in
Type: integer Private
Default: -1
Used in: Heatmap

# heatmapAutoAdjust

Flag to adjust the range of the heatmaps when zooming in/out
Type: boolean
Default: false
Used in: Heatmap

# heatmapCellBox

Flag to print a box around the heatmap cells
Type: boolean
Default: true
Used in: Heatmap

# heatmapCellBoxColor

Color for the heatmap boxes around the cells
Type: color
Default: rgb(102,102,102)
Used in: Heatmap

# heatmapCellBoxColorHighlight

Color for the highlighted heatmap cells
Type: color
Default: rgb(255,215,0)
Used in: Heatmap

# heatmapCellBoxHighlightWidth

Width for the highlighting heatmap boxes around the cells
Type: float
Default: 1
Used in: Heatmap

# heatmapCellBoxWidth

Width for the heatmap boxes around the cells
Type: float
Default: 1
Used in: Heatmap

# heatmapCollapse

Flag to collapse cells in heatmaps of type circle or hexagon. If true cells are ploted without outline otherwise the outline is the foreground color
Type: boolean
Default: false
Used in: Heatmap

# heatmapIndicatorHeight

Length in pixels for the heatmap indicator
Type: integer
Default: 35
Used in: Heatmap

# heatmapIndicatorHistogram

Flag to show histogram in the heatmap indicator
Type: boolean
Default: false
Used in: Heatmap

# heatmapIndicatorHistogramColor

Color for the heatmap indicator histogram
Type: color
Default: rgb(0,255,255)
Used in: Heatmap

# heatmapIndicatorPosition

Position for the heatmap indicator
Type: string
Default: right
Options: topLeft, top, topRight, right
Used in: Heatmap

# heatmapIndicatorWidth

Length in pixels for the heatmap indicator line width used for increase the size of the indicator
Type: integer
Default: 150
Used in: Heatmap

# heatmapType

Type of Heatmap used to overlay a layer on top of an image. Special for spatial transcriptomics and UpSet plots
Type: string
Default: normal
Options: normal, circle, hexagon, upset
Used in: Heatmap

# isMultidimensionalData

Flag to indicate if there is more than a single data set
Type: boolean Private
Default: false
Used in: Heatmap

# showHeatmapIndicator

Flag to show/hide the heatmap color indicator
Type: boolean
Default: true
Used in: Heatmap

# smpIndicesStart

Number that indicates starting point for samples in heatmaps when the canvas is zoom in
Type: integer Private
Default: -1
Used in: Heatmap

# smpTitleLabelPosition

Position for sample labels
Type: string
Default: left
Options: left, right
Used in: Heatmap

# varIndicesStart

Number that indicates starting point for variables in heatmaps when the canvas is zoom in
Type: integer Private
Default: -1
Used in: Heatmap

# varTitleLabelPosition

Position for variable labels
Type: string
Default: bottom
Options: bottom, top
Used in: Heatmap

⇧