Ten comparisons filtered by an FDR cutoff

library(canvasXpress)
y=read.table("https://www.canvasxpress.org/data/r/cX-statistics10-dat.txt", header=TRUE, sep="\t", quote="", row.names=1, fill=TRUE, check.names=FALSE, stringsAsFactors=FALSE)
x=read.table("https://www.canvasxpress.org/data/r/cX-statistics10-smp.txt", header=TRUE, sep="\t", quote="", row.names=1, fill=TRUE, check.names=FALSE, stringsAsFactors=FALSE)
canvasXpress(
data=y,
smpAnnot=x,
axisAlgorithm="rPretty",
axisTitleFontStyle="bold",
colorBy="Month",
colorScheme="Spectral",
graphOrientation="vertical",
graphType="Boxplot",
groupingFactors=list("Month"),
jitter=TRUE,
showBoxplotOriginalData=TRUE,
showLegend=FALSE,
showStatInference=TRUE,
smpTextRotate=0,
smpTitle="Month",
smpTitleFontStyle="bold",
statInference=list(annotate="stars", comparisons=list(list(groups=list("05 May", "06 June"), p=0.446096757136698), list(groups=list("05 May", "07 July"), p=2.6466786037185e-05), list(groups=list("05 May", "08 August"), p=0.000216856559192423), list(groups=list("05 May", "09 September"), p=0.215801553720382), list(groups=list("06 June", "07 July"), p=0.00218168499591115), list(groups=list("06 June", "08 August"), p=0.00426931828252099), list(groups=list("06 June", "09 September"), p=0.793655482852686), list(groups=list("07 July", "08 August"), p=0.932603292528488), list(groups=list("07 July", "09 September"), p=0.00073610319564773), list(groups=list("08 August", "09 September"), p=0.00286828992103208)), correction=list(method="BH"), fdrThreshold=0.01),
title="Ozone by month, all pairs (BH, FDR cutoff 0.01)",
xAxis=list("Ozone"),
xAxisTitle="Ozone"
)

from canvasxpress.canvas import CanvasXpress
from canvasxpress.plot import show_in_browser

if __name__ == "__main__":
  # Define the chart with its data and configuration
  chart: CanvasXpress = CanvasXpress(
    render_to = "statistics10",
    data = {
      "y": {
        "vars": ["Ozone"],
        "smps": ["Obs1", "Obs2", "Obs3", "Obs4", "Obs5", "Obs6", "Obs7", "Obs8", "Obs9", "Obs10", "Obs11", "Obs12", "Obs13", "Obs14", "Obs15", "Obs16", "Obs17", "Obs18", "Obs19", "Obs20", "Obs21", "Obs22", "Obs23", "Obs24", "Obs25", "Obs26", "Obs27", "Obs28", "Obs29", "Obs30", "Obs31", "Obs32", "Obs33", "Obs34", "Obs35", "Obs36", "Obs37", "Obs38", "Obs39", "Obs40", "Obs41", "Obs42", "Obs43", "Obs44", "Obs45", "Obs46", "Obs47", "Obs48", "Obs49", "Obs50", "Obs51", "Obs52", "Obs53", "Obs54", "Obs55", "Obs56", "Obs57", "Obs58", "Obs59", "Obs60", "Obs61", "Obs62", "Obs63", "Obs64", "Obs65", "Obs66", "Obs67", "Obs68", "Obs69", "Obs70", "Obs71", "Obs72", "Obs73", "Obs74", "Obs75", "Obs76", "Obs77", "Obs78", "Obs79", "Obs80", "Obs81", "Obs82", "Obs83", "Obs84", "Obs85", "Obs86", "Obs87", "Obs88", "Obs89", "Obs90", "Obs91", "Obs92", "Obs93", "Obs94", "Obs95", "Obs96", "Obs97", "Obs98", "Obs99", "Obs100", "Obs101", "Obs102", "Obs103", "Obs104", "Obs105", "Obs106", "Obs107", "Obs108", "Obs109", "Obs110", "Obs111", "Obs112", "Obs113", "Obs114", "Obs115", "Obs116"],
        "data": [
          [41, 36, 12, 18, 28, 23, 19, 8, 7, 16, 11, 14, 18, 14, 34, 6, 30, 11, 1, 11, 4, 32, 23, 45, 115, 37, 29, 71, 39, 23, 21, 37, 20, 12, 13, 135, 49, 32, 64, 40, 77, 97, 97, 85, 10, 27, 7, 48, 35, 61, 79, 63, 16, 80, 108, 20, 52, 82, 50, 64, 59, 39, 9, 16, 78, 35, 66, 122, 89, 110, 44, 28, 65, 22, 59, 23, 31, 44, 21, 9, 45, 168, 73, 76, 118, 84, 85, 96, 78, 73, 91, 47, 32, 20, 23, 21, 24, 44, 21, 28, 9, 13, 46, 18, 13, 24, 16, 13, 23, 36, 7, 14, 30, 14, 18, 20]
        ]
      },
      "x": {
        "Month": ["05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September"]
      }
    },
    config = {
      "graphType": "Boxplot",
      "graphOrientation": "vertical",
      "groupingFactors": ["Month"],
      "xAxis": ["Ozone"],
      "xAxisTitle": "Ozone",
      "smpTitle": "Month",
      "smpTitleFontStyle": "bold",
      "axisTitleFontStyle": "bold",
      "axisAlgorithm": "rPretty",
      "smpTextRotate": 0,
      "showLegend": False,
      "colorBy": "Month",
      "title": "Ozone by month, all pairs (BH, FDR cutoff 0.01)",
      "showStatInference": True,
      "statInference": {
        "correction": {
          "method": "BH"
        },
        "annotate": "stars",
        "fdrThreshold": 0.01,
        "comparisons": [
          {
            "groups": ["05 May", "06 June"],
            "p": 0.446096757136698
          },
          {
            "groups": ["05 May", "07 July"],
            "p": 2.6466786037185e-05
          },
          {
            "groups": ["05 May", "08 August"],
            "p": 0.000216856559192423
          },
          {
            "groups": ["05 May", "09 September"],
            "p": 0.215801553720382
          },
          {
            "groups": ["06 June", "07 July"],
            "p": 0.00218168499591115
          },
          {
            "groups": ["06 June", "08 August"],
            "p": 0.00426931828252099
          },
          {
            "groups": ["06 June", "09 September"],
            "p": 0.793655482852686
          },
          {
            "groups": ["07 July", "08 August"],
            "p": 0.932603292528488
          },
          {
            "groups": ["07 July", "09 September"],
            "p": 0.00073610319564773
          },
          {
            "groups": ["08 August", "09 September"],
            "p": 0.00286828992103208
          }
        ]
      },
      "showBoxplotOriginalData": True,
      "jitter": True,
      "colorScheme": "Spectral"
    },
    width = 600,
    height = 600
  )

  # Display the chart in its own Web page
  show_in_browser(chart)

Run this notebook:

from canvasxpress.canvas import CanvasXpress
from canvasxpress.plot import graph

graph(
  CanvasXpress(
    render_to = "statistics10",
    data = {
      "y": {
        "vars": ["Ozone"],
        "smps": ["Obs1", "Obs2", "Obs3", "Obs4", "Obs5", "Obs6", "Obs7", "Obs8", "Obs9", "Obs10", "Obs11", "Obs12", "Obs13", "Obs14", "Obs15", "Obs16", "Obs17", "Obs18", "Obs19", "Obs20", "Obs21", "Obs22", "Obs23", "Obs24", "Obs25", "Obs26", "Obs27", "Obs28", "Obs29", "Obs30", "Obs31", "Obs32", "Obs33", "Obs34", "Obs35", "Obs36", "Obs37", "Obs38", "Obs39", "Obs40", "Obs41", "Obs42", "Obs43", "Obs44", "Obs45", "Obs46", "Obs47", "Obs48", "Obs49", "Obs50", "Obs51", "Obs52", "Obs53", "Obs54", "Obs55", "Obs56", "Obs57", "Obs58", "Obs59", "Obs60", "Obs61", "Obs62", "Obs63", "Obs64", "Obs65", "Obs66", "Obs67", "Obs68", "Obs69", "Obs70", "Obs71", "Obs72", "Obs73", "Obs74", "Obs75", "Obs76", "Obs77", "Obs78", "Obs79", "Obs80", "Obs81", "Obs82", "Obs83", "Obs84", "Obs85", "Obs86", "Obs87", "Obs88", "Obs89", "Obs90", "Obs91", "Obs92", "Obs93", "Obs94", "Obs95", "Obs96", "Obs97", "Obs98", "Obs99", "Obs100", "Obs101", "Obs102", "Obs103", "Obs104", "Obs105", "Obs106", "Obs107", "Obs108", "Obs109", "Obs110", "Obs111", "Obs112", "Obs113", "Obs114", "Obs115", "Obs116"],
        "data": [
          [41, 36, 12, 18, 28, 23, 19, 8, 7, 16, 11, 14, 18, 14, 34, 6, 30, 11, 1, 11, 4, 32, 23, 45, 115, 37, 29, 71, 39, 23, 21, 37, 20, 12, 13, 135, 49, 32, 64, 40, 77, 97, 97, 85, 10, 27, 7, 48, 35, 61, 79, 63, 16, 80, 108, 20, 52, 82, 50, 64, 59, 39, 9, 16, 78, 35, 66, 122, 89, 110, 44, 28, 65, 22, 59, 23, 31, 44, 21, 9, 45, 168, 73, 76, 118, 84, 85, 96, 78, 73, 91, 47, 32, 20, 23, 21, 24, 44, 21, 28, 9, 13, 46, 18, 13, 24, 16, 13, 23, 36, 7, 14, 30, 14, 18, 20]
        ]
      },
      "x": {
        "Month": ["05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September"]
      }
    },
    config = {
      "graphType": "Boxplot",
      "graphOrientation": "vertical",
      "groupingFactors": ["Month"],
      "xAxis": ["Ozone"],
      "xAxisTitle": "Ozone",
      "smpTitle": "Month",
      "smpTitleFontStyle": "bold",
      "axisTitleFontStyle": "bold",
      "axisAlgorithm": "rPretty",
      "smpTextRotate": 0,
      "showLegend": False,
      "colorBy": "Month",
      "title": "Ozone by month, all pairs (BH, FDR cutoff 0.01)",
      "showStatInference": True,
      "statInference": {
        "correction": {
          "method": "BH"
        },
        "annotate": "stars",
        "fdrThreshold": 0.01,
        "comparisons": [
          {
            "groups": ["05 May", "06 June"],
            "p": 0.446096757136698
          },
          {
            "groups": ["05 May", "07 July"],
            "p": 2.6466786037185e-05
          },
          {
            "groups": ["05 May", "08 August"],
            "p": 0.000216856559192423
          },
          {
            "groups": ["05 May", "09 September"],
            "p": 0.215801553720382
          },
          {
            "groups": ["06 June", "07 July"],
            "p": 0.00218168499591115
          },
          {
            "groups": ["06 June", "08 August"],
            "p": 0.00426931828252099
          },
          {
            "groups": ["06 June", "09 September"],
            "p": 0.793655482852686
          },
          {
            "groups": ["07 July", "08 August"],
            "p": 0.932603292528488
          },
          {
            "groups": ["07 July", "09 September"],
            "p": 0.00073610319564773
          },
          {
            "groups": ["08 August", "09 September"],
            "p": 0.00286828992103208
          }
        ]
      },
      "showBoxplotOriginalData": True,
      "jitter": True,
      "colorScheme": "Spectral"
    },
    width = 600,
    height = 600
  )
)

using CanvasXpress

canvasxpress(Dict(
  "y" => Dict(
    "vars" => ["Ozone"],
    "smps" => ["Obs1", "Obs2", "Obs3", "Obs4", "Obs5", "Obs6", "Obs7", "Obs8", "Obs9", "Obs10", "Obs11", "Obs12", "Obs13", "Obs14", "Obs15", "Obs16", "Obs17", "Obs18", "Obs19", "Obs20", "Obs21", "Obs22", "Obs23", "Obs24", "Obs25", "Obs26", "Obs27", "Obs28", "Obs29", "Obs30", "Obs31", "Obs32", "Obs33", "Obs34", "Obs35", "Obs36", "Obs37", "Obs38", "Obs39", "Obs40", "Obs41", "Obs42", "Obs43", "Obs44", "Obs45", "Obs46", "Obs47", "Obs48", "Obs49", "Obs50", "Obs51", "Obs52", "Obs53", "Obs54", "Obs55", "Obs56", "Obs57", "Obs58", "Obs59", "Obs60", "Obs61", "Obs62", "Obs63", "Obs64", "Obs65", "Obs66", "Obs67", "Obs68", "Obs69", "Obs70", "Obs71", "Obs72", "Obs73", "Obs74", "Obs75", "Obs76", "Obs77", "Obs78", "Obs79", "Obs80", "Obs81", "Obs82", "Obs83", "Obs84", "Obs85", "Obs86", "Obs87", "Obs88", "Obs89", "Obs90", "Obs91", "Obs92", "Obs93", "Obs94", "Obs95", "Obs96", "Obs97", "Obs98", "Obs99", "Obs100", "Obs101", "Obs102", "Obs103", "Obs104", "Obs105", "Obs106", "Obs107", "Obs108", "Obs109", "Obs110", "Obs111", "Obs112", "Obs113", "Obs114", "Obs115", "Obs116"],
    "data" => [
      [41, 36, 12, 18, 28, 23, 19, 8, 7, 16, 11, 14, 18, 14, 34, 6, 30, 11, 1, 11, 4, 32, 23, 45, 115, 37, 29, 71, 39, 23, 21, 37, 20, 12, 13, 135, 49, 32, 64, 40, 77, 97, 97, 85, 10, 27, 7, 48, 35, 61, 79, 63, 16, 80, 108, 20, 52, 82, 50, 64, 59, 39, 9, 16, 78, 35, 66, 122, 89, 110, 44, 28, 65, 22, 59, 23, 31, 44, 21, 9, 45, 168, 73, 76, 118, 84, 85, 96, 78, 73, 91, 47, 32, 20, 23, 21, 24, 44, 21, 28, 9, 13, 46, 18, 13, 24, 16, 13, 23, 36, 7, 14, 30, 14, 18, 20]
    ]
  ),
  "x" => Dict(
    "Month" => ["05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "05 May", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "06 June", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "07 July", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "08 August", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September", "09 September"]
  )
);
  graphType = "Boxplot",
  graphOrientation = "vertical",
  groupingFactors = ["Month"],
  xAxis = ["Ozone"],
  xAxisTitle = "Ozone",
  smpTitle = "Month",
  smpTitleFontStyle = "bold",
  axisTitleFontStyle = "bold",
  axisAlgorithm = "rPretty",
  smpTextRotate = 0,
  showLegend = false,
  colorBy = "Month",
  title = "Ozone by month, all pairs (BH, FDR cutoff 0.01)",
  showStatInference = true,
  statInference = Dict(
    "correction" => Dict(
      "method" => "BH"
    ),
    "annotate" => "stars",
    "fdrThreshold" => 0.01,
    "comparisons" => [
      Dict(
        "groups" => ["05 May", "06 June"],
        "p" => 0.446096757136698
      ),
      Dict(
        "groups" => ["05 May", "07 July"],
        "p" => 2.6466786037185e-05
      ),
      Dict(
        "groups" => ["05 May", "08 August"],
        "p" => 0.000216856559192423
      ),
      Dict(
        "groups" => ["05 May", "09 September"],
        "p" => 0.215801553720382
      ),
      Dict(
        "groups" => ["06 June", "07 July"],
        "p" => 0.00218168499591115
      ),
      Dict(
        "groups" => ["06 June", "08 August"],
        "p" => 0.00426931828252099
      ),
      Dict(
        "groups" => ["06 June", "09 September"],
        "p" => 0.793655482852686
      ),
      Dict(
        "groups" => ["07 July", "08 August"],
        "p" => 0.932603292528488
      ),
      Dict(
        "groups" => ["07 July", "09 September"],
        "p" => 0.00073610319564773
      ),
      Dict(
        "groups" => ["08 August", "09 September"],
        "p" => 0.00286828992103208
      )
    ]
  ),
  showBoxplotOriginalData = true,
  jitter = true,
  colorScheme = "Spectral"
)