Comparing Data Distributions with Box Plots

library(canvasXpress)
y=read.table("https://www.canvasxpress.org/data/r/cX-toothgrowth-dat.txt", header=TRUE, sep="\t", quote="", row.names=1, fill=TRUE, check.names=FALSE, stringsAsFactors=FALSE)
x=read.table("https://www.canvasxpress.org/data/r/cX-toothgrowth-smp.txt", header=TRUE, sep="\t", quote="", row.names=1, fill=TRUE, check.names=FALSE, stringsAsFactors=FALSE)
canvasXpress(
data=y,
smpAnnot=x,
boxplotColor="#00AFBB",
decorations=list(marker=list(list(color="black", group=0, group2=1, scope=list("OJ"), text="<0.0002", type="pwc", variable="len", ymax=35.385, ymin=34.494), list(color="black", group=0, group2=2, scope=list("OJ"), text="<0.0001", type="pwc", variable="len", ymax=38.949, ymin=38.058), list(color="black", group=1, group2=2, scope=list("OJ"), text=0.039, type="pwc", variable="len", ymax=42.513, ymin=41.622), list(color="black", group=0, group2=1, scope=list("VC"), text="<0.0001", type="pwc", variable="len", ymax=35.385, ymin=34.494), list(color="black", group=0, group2=2, scope=list("VC"), text="<0.0001", type="pwc", variable="len", ymax=38.949, ymin=38.058), list(color="black", group=1, group2=2, scope=list("VC"), text="<0.0001", type="pwc", variable="len", ymax=42.513, ymin=41.622))),
graphOrientation="vertical",
graphType="Boxplot",
groupingFactors=list("dose"),
layoutTopology="1X2",
segregateSamplesBy=list("supp"),
smpTextRotate=90,
smpTitle="len",
sortOnGrouping="ascending",
theme="GGPlot",
xAxis=list("len")
)

from canvasxpress.canvas import CanvasXpress
from canvasxpress.plot import show_in_browser

if __name__ == "__main__":
  # Define the chart with its data and configuration
  chart: CanvasXpress = CanvasXpress(
    render_to = "boxplot21",
    data = {
      "x": {
        "dose": ["0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "1", "1", "1", "1", "1", "1", "1", "1", "1", "1", "2", "2", "2", "2", "2", "2", "2", "2", "2", "2", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "1", "1", "1", "1", "1", "1", "1", "1", "1", "1", "2", "2", "2", "2", "2", "2", "2", "2", "2", "2"],
        "order": [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10],
        "supp": ["VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ"]
      },
      "y": {
        "data": [
          [4.2, 11.5, 7.3, 5.8, 6.4, 10, 11.2, 11.2, 5.2, 7, 16.5, 16.5, 15.2, 17.3, 22.5, 17.3, 13.6, 14.5, 18.8, 15.5, 23.6, 18.5, 33.9, 25.5, 26.4, 32.5, 26.7, 21.5, 23.3, 29.5, 15.2, 21.5, 17.6, 9.7, 14.5, 10, 8.2, 9.4, 16.5, 9.7, 19.7, 23.3, 23.6, 26.4, 20, 25.2, 25.8, 21.2, 14.5, 27.3, 25.5, 26.4, 22.4, 24.5, 24.8, 30.9, 26.4, 27.3, 29.4, 23]
        ],
        "smps": ["Var1", "Var2", "Var3", "Var4", "Var5", "Var6", "Var7", "Var8", "Var9", "Var10", "Var11", "Var12", "Var13", "Var14", "Var15", "Var16", "Var17", "Var18", "Var19", "Var20", "Var21", "Var22", "Var23", "Var24", "Var25", "Var26", "Var27", "Var28", "Var29", "Var30", "Var31", "Var32", "Var33", "Var34", "Var35", "Var36", "Var37", "Var38", "Var39", "Var40", "Var41", "Var42", "Var43", "Var44", "Var45", "Var46", "Var47", "Var48", "Var49", "Var50", "Var51", "Var52", "Var53", "Var54", "Var55", "Var56", "Var57", "Var58", "Var59", "Var60"],
        "vars": ["len"]
      }
    },
    config = {
      "boxplotColor": "#00AFBB",
      "decorations": {
        "marker": [
          {
            "color": "black",
            "group": 0,
            "group2": 1,
            "scope": ["OJ"],
            "text": "<0.0002",
            "type": "pwc",
            "variable": "len",
            "ymax": 35.385,
            "ymin": 34.494
          },
          {
            "color": "black",
            "group": 0,
            "group2": 2,
            "scope": ["OJ"],
            "text": "<0.0001",
            "type": "pwc",
            "variable": "len",
            "ymax": 38.949,
            "ymin": 38.058
          },
          {
            "color": "black",
            "group": 1,
            "group2": 2,
            "scope": ["OJ"],
            "text": "0.039",
            "type": "pwc",
            "variable": "len",
            "ymax": 42.513,
            "ymin": 41.622
          },
          {
            "color": "black",
            "group": 0,
            "group2": 1,
            "scope": ["VC"],
            "text": "<0.0001",
            "type": "pwc",
            "variable": "len",
            "ymax": 35.385,
            "ymin": 34.494
          },
          {
            "color": "black",
            "group": 0,
            "group2": 2,
            "scope": ["VC"],
            "text": "<0.0001",
            "type": "pwc",
            "variable": "len",
            "ymax": 38.949,
            "ymin": 38.058
          },
          {
            "color": "black",
            "group": 1,
            "group2": 2,
            "scope": ["VC"],
            "text": "<0.0001",
            "type": "pwc",
            "variable": "len",
            "ymax": 42.513,
            "ymin": 41.622
          }
        ]
      },
      "graphOrientation": "vertical",
      "graphType": "Boxplot",
      "groupingFactors": ["dose"],
      "layoutTopology": "1X2",
      "segregateSamplesBy": ["supp"],
      "smpTextRotate": 90,
      "smpTitle": "len",
      "sortOnGrouping": "ascending",
      "theme": "GGPlot",
      "xAxis": ["len"]
    },
    width = 600,
    height = 600
  )

  # Display the chart in its own Web page
  show_in_browser(chart)

Run this notebook:

from canvasxpress.canvas import CanvasXpress
from canvasxpress.plot import graph

graph(
  CanvasXpress(
    render_to = "boxplot21",
    data = {
      "x": {
        "dose": ["0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "1", "1", "1", "1", "1", "1", "1", "1", "1", "1", "2", "2", "2", "2", "2", "2", "2", "2", "2", "2", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "1", "1", "1", "1", "1", "1", "1", "1", "1", "1", "2", "2", "2", "2", "2", "2", "2", "2", "2", "2"],
        "order": [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10],
        "supp": ["VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ"]
      },
      "y": {
        "data": [
          [4.2, 11.5, 7.3, 5.8, 6.4, 10, 11.2, 11.2, 5.2, 7, 16.5, 16.5, 15.2, 17.3, 22.5, 17.3, 13.6, 14.5, 18.8, 15.5, 23.6, 18.5, 33.9, 25.5, 26.4, 32.5, 26.7, 21.5, 23.3, 29.5, 15.2, 21.5, 17.6, 9.7, 14.5, 10, 8.2, 9.4, 16.5, 9.7, 19.7, 23.3, 23.6, 26.4, 20, 25.2, 25.8, 21.2, 14.5, 27.3, 25.5, 26.4, 22.4, 24.5, 24.8, 30.9, 26.4, 27.3, 29.4, 23]
        ],
        "smps": ["Var1", "Var2", "Var3", "Var4", "Var5", "Var6", "Var7", "Var8", "Var9", "Var10", "Var11", "Var12", "Var13", "Var14", "Var15", "Var16", "Var17", "Var18", "Var19", "Var20", "Var21", "Var22", "Var23", "Var24", "Var25", "Var26", "Var27", "Var28", "Var29", "Var30", "Var31", "Var32", "Var33", "Var34", "Var35", "Var36", "Var37", "Var38", "Var39", "Var40", "Var41", "Var42", "Var43", "Var44", "Var45", "Var46", "Var47", "Var48", "Var49", "Var50", "Var51", "Var52", "Var53", "Var54", "Var55", "Var56", "Var57", "Var58", "Var59", "Var60"],
        "vars": ["len"]
      }
    },
    config = {
      "boxplotColor": "#00AFBB",
      "decorations": {
        "marker": [
          {
            "color": "black",
            "group": 0,
            "group2": 1,
            "scope": ["OJ"],
            "text": "<0.0002",
            "type": "pwc",
            "variable": "len",
            "ymax": 35.385,
            "ymin": 34.494
          },
          {
            "color": "black",
            "group": 0,
            "group2": 2,
            "scope": ["OJ"],
            "text": "<0.0001",
            "type": "pwc",
            "variable": "len",
            "ymax": 38.949,
            "ymin": 38.058
          },
          {
            "color": "black",
            "group": 1,
            "group2": 2,
            "scope": ["OJ"],
            "text": "0.039",
            "type": "pwc",
            "variable": "len",
            "ymax": 42.513,
            "ymin": 41.622
          },
          {
            "color": "black",
            "group": 0,
            "group2": 1,
            "scope": ["VC"],
            "text": "<0.0001",
            "type": "pwc",
            "variable": "len",
            "ymax": 35.385,
            "ymin": 34.494
          },
          {
            "color": "black",
            "group": 0,
            "group2": 2,
            "scope": ["VC"],
            "text": "<0.0001",
            "type": "pwc",
            "variable": "len",
            "ymax": 38.949,
            "ymin": 38.058
          },
          {
            "color": "black",
            "group": 1,
            "group2": 2,
            "scope": ["VC"],
            "text": "<0.0001",
            "type": "pwc",
            "variable": "len",
            "ymax": 42.513,
            "ymin": 41.622
          }
        ]
      },
      "graphOrientation": "vertical",
      "graphType": "Boxplot",
      "groupingFactors": ["dose"],
      "layoutTopology": "1X2",
      "segregateSamplesBy": ["supp"],
      "smpTextRotate": 90,
      "smpTitle": "len",
      "sortOnGrouping": "ascending",
      "theme": "GGPlot",
      "xAxis": ["len"]
    },
    width = 600,
    height = 600
  )
)

using CanvasXpress

canvasxpress(Dict(
  "x" => Dict(
    "dose" => ["0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "1", "1", "1", "1", "1", "1", "1", "1", "1", "1", "2", "2", "2", "2", "2", "2", "2", "2", "2", "2", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "0.5", "1", "1", "1", "1", "1", "1", "1", "1", "1", "1", "2", "2", "2", "2", "2", "2", "2", "2", "2", "2"],
    "order" => [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10],
    "supp" => ["VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "VC", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ", "OJ"]
  ),
  "y" => Dict(
    "data" => [
      [4.2, 11.5, 7.3, 5.8, 6.4, 10, 11.2, 11.2, 5.2, 7, 16.5, 16.5, 15.2, 17.3, 22.5, 17.3, 13.6, 14.5, 18.8, 15.5, 23.6, 18.5, 33.9, 25.5, 26.4, 32.5, 26.7, 21.5, 23.3, 29.5, 15.2, 21.5, 17.6, 9.7, 14.5, 10, 8.2, 9.4, 16.5, 9.7, 19.7, 23.3, 23.6, 26.4, 20, 25.2, 25.8, 21.2, 14.5, 27.3, 25.5, 26.4, 22.4, 24.5, 24.8, 30.9, 26.4, 27.3, 29.4, 23]
    ],
    "smps" => ["Var1", "Var2", "Var3", "Var4", "Var5", "Var6", "Var7", "Var8", "Var9", "Var10", "Var11", "Var12", "Var13", "Var14", "Var15", "Var16", "Var17", "Var18", "Var19", "Var20", "Var21", "Var22", "Var23", "Var24", "Var25", "Var26", "Var27", "Var28", "Var29", "Var30", "Var31", "Var32", "Var33", "Var34", "Var35", "Var36", "Var37", "Var38", "Var39", "Var40", "Var41", "Var42", "Var43", "Var44", "Var45", "Var46", "Var47", "Var48", "Var49", "Var50", "Var51", "Var52", "Var53", "Var54", "Var55", "Var56", "Var57", "Var58", "Var59", "Var60"],
    "vars" => ["len"]
  )
);
  boxplotColor = "#00AFBB",
  decorations = Dict(
    "marker" => [
      Dict(
        "color" => "black",
        "group" => 0,
        "group2" => 1,
        "scope" => ["OJ"],
        "text" => "<0.0002",
        "type" => "pwc",
        "variable" => "len",
        "ymax" => 35.385,
        "ymin" => 34.494
      ),
      Dict(
        "color" => "black",
        "group" => 0,
        "group2" => 2,
        "scope" => ["OJ"],
        "text" => "<0.0001",
        "type" => "pwc",
        "variable" => "len",
        "ymax" => 38.949,
        "ymin" => 38.058
      ),
      Dict(
        "color" => "black",
        "group" => 1,
        "group2" => 2,
        "scope" => ["OJ"],
        "text" => "0.039",
        "type" => "pwc",
        "variable" => "len",
        "ymax" => 42.513,
        "ymin" => 41.622
      ),
      Dict(
        "color" => "black",
        "group" => 0,
        "group2" => 1,
        "scope" => ["VC"],
        "text" => "<0.0001",
        "type" => "pwc",
        "variable" => "len",
        "ymax" => 35.385,
        "ymin" => 34.494
      ),
      Dict(
        "color" => "black",
        "group" => 0,
        "group2" => 2,
        "scope" => ["VC"],
        "text" => "<0.0001",
        "type" => "pwc",
        "variable" => "len",
        "ymax" => 38.949,
        "ymin" => 38.058
      ),
      Dict(
        "color" => "black",
        "group" => 1,
        "group2" => 2,
        "scope" => ["VC"],
        "text" => "<0.0001",
        "type" => "pwc",
        "variable" => "len",
        "ymax" => 42.513,
        "ymin" => 41.622
      )
    ]
  ),
  graphOrientation = "vertical",
  graphType = "Boxplot",
  groupingFactors = ["dose"],
  layoutTopology = "1X2",
  segregateSamplesBy = ["supp"],
  smpTextRotate = 90,
  smpTitle = "len",
  sortOnGrouping = "ascending",
  theme = "GGPlot",
  xAxis = ["len"]
)