Radial Layout for Network Graphs

library(canvasXpress)
nodes=read.table("https://www.canvasxpress.org/data/r/cX-networkradial-nodes.txt", header=TRUE, sep="\t", quote="", fill=TRUE, check.names=FALSE, stringsAsFactors=FALSE)
edges=read.table("https://www.canvasxpress.org/data/r/cX-networkradial-edges.txt", header=TRUE, sep="\t", quote="", fill=TRUE, check.names=FALSE, stringsAsFactors=FALSE)
canvasXpress(
nodeData=nodes,
edgeData=edges,
graphType="Network",
networkLayoutType="radial",
nodeFontColor="rgb(29,34,43)",
nodeScaleFontFactor=2,
showAnimation=TRUE,
title="Radial Network"
)

from canvasxpress.canvas import CanvasXpress
from canvasxpress.plot import show_in_browser

if __name__ == "__main__":
  # Define the chart with its data and configuration
  chart: CanvasXpress = CanvasXpress(
    render_to = "network14",
    data = {
      "edges": [
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene1",
          "id2": "Gene2",
          "type": "line"
        },
        {
          "color": "rgb(51,12,152)",
          "id1": "SNP1",
          "id2": "PH1",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene2",
          "id2": "Gene7",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene2",
          "id2": "Gene8",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene1",
          "id2": "Gene3",
          "type": "line"
        },
        {
          "color": "rgb(51,12,152)",
          "id1": "SNP4",
          "id2": "PH4",
          "type": "line"
        },
        {
          "color": "rgb(102,12,152)",
          "id1": "PH1",
          "id2": "PH1a",
          "type": "line"
        },
        {
          "color": "rgb(102,12,152)",
          "id1": "PH1",
          "id2": "PH1b",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene4",
          "id2": "SNP3",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene6",
          "id2": "SNP4",
          "type": "line"
        },
        {
          "color": "rgb(51,12,152)",
          "id1": "PH2",
          "id2": "PH2a",
          "type": "line"
        },
        {
          "color": "rgb(102,12,152)",
          "id1": "PH2",
          "id2": "PH2b",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene6",
          "id2": "SNP5",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene7",
          "id2": "SNP6",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "SNP6",
          "id2": "SNP7",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene1",
          "id2": "Gene4",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene1",
          "id2": "Gene5",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "SNP7",
          "id2": "Gene6",
          "type": "line"
        },
        {
          "color": "rgb(153,12,255)",
          "id1": "SNP6",
          "id2": "SNP8",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene3",
          "id2": "SNP1",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene3",
          "id2": "SNP2",
          "type": "line"
        },
        {
          "color": "rgb(153,12,255)",
          "id1": "SNP2",
          "id2": "PH2",
          "type": "line"
        },
        {
          "color": "rgb(51,12,152)",
          "id1": "SNP3",
          "id2": "PH3",
          "type": "line"
        },
        {
          "color": "rgb(102,12,152)",
          "id1": "PH2b",
          "id2": "PH2ba",
          "type": "line"
        }
      ],
      "nodes": [
        {
          "color": "rgb(255,0,0)",
          "id": "Gene1",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene2",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene3",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene4",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene5",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene6",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene7",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene8",
          "shape": "square"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP1",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP2",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP3",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP4",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP5",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP6",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP7",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP8",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH1",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH1a",
          "parentNode": "PH1",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH1b",
          "parentNode": "PH1",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH2",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH2a",
          "parentNode": "PH2",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH2b",
          "parentNode": "PH2",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH2ba",
          "parentNode": "PH2b",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH3",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH4",
          "shape": "star"
        }
      ]
    },
    config = {
      "graphType": "Network",
      "networkLayoutType": "radial",
      "nodeFontColor": "rgb(29,34,43)",
      "nodeScaleFontFactor": 2,
      "showAnimation": True,
      "title": "Radial Network"
    },
    width = 600,
    height = 600
  )

  # Display the chart in its own Web page
  show_in_browser(chart)

Run this notebook:

from canvasxpress.canvas import CanvasXpress
from canvasxpress.plot import graph

graph(
  CanvasXpress(
    render_to = "network14",
    data = {
      "edges": [
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene1",
          "id2": "Gene2",
          "type": "line"
        },
        {
          "color": "rgb(51,12,152)",
          "id1": "SNP1",
          "id2": "PH1",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene2",
          "id2": "Gene7",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene2",
          "id2": "Gene8",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene1",
          "id2": "Gene3",
          "type": "line"
        },
        {
          "color": "rgb(51,12,152)",
          "id1": "SNP4",
          "id2": "PH4",
          "type": "line"
        },
        {
          "color": "rgb(102,12,152)",
          "id1": "PH1",
          "id2": "PH1a",
          "type": "line"
        },
        {
          "color": "rgb(102,12,152)",
          "id1": "PH1",
          "id2": "PH1b",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene4",
          "id2": "SNP3",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene6",
          "id2": "SNP4",
          "type": "line"
        },
        {
          "color": "rgb(51,12,152)",
          "id1": "PH2",
          "id2": "PH2a",
          "type": "line"
        },
        {
          "color": "rgb(102,12,152)",
          "id1": "PH2",
          "id2": "PH2b",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene6",
          "id2": "SNP5",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene7",
          "id2": "SNP6",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "SNP6",
          "id2": "SNP7",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene1",
          "id2": "Gene4",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene1",
          "id2": "Gene5",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "SNP7",
          "id2": "Gene6",
          "type": "line"
        },
        {
          "color": "rgb(153,12,255)",
          "id1": "SNP6",
          "id2": "SNP8",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene3",
          "id2": "SNP1",
          "type": "line"
        },
        {
          "color": "rgb(51,12,255)",
          "id1": "Gene3",
          "id2": "SNP2",
          "type": "line"
        },
        {
          "color": "rgb(153,12,255)",
          "id1": "SNP2",
          "id2": "PH2",
          "type": "line"
        },
        {
          "color": "rgb(51,12,152)",
          "id1": "SNP3",
          "id2": "PH3",
          "type": "line"
        },
        {
          "color": "rgb(102,12,152)",
          "id1": "PH2b",
          "id2": "PH2ba",
          "type": "line"
        }
      ],
      "nodes": [
        {
          "color": "rgb(255,0,0)",
          "id": "Gene1",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene2",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene3",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene4",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene5",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene6",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene7",
          "shape": "square"
        },
        {
          "color": "rgb(255,0,0)",
          "id": "Gene8",
          "shape": "square"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP1",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP2",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP3",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP4",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP5",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP6",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP7",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,0)",
          "id": "SNP8",
          "shape": "sphere"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH1",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH1a",
          "parentNode": "PH1",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH1b",
          "parentNode": "PH1",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH2",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH2a",
          "parentNode": "PH2",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH2b",
          "parentNode": "PH2",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH2ba",
          "parentNode": "PH2b",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH3",
          "shape": "star"
        },
        {
          "color": "rgb(0,255,255)",
          "id": "PH4",
          "shape": "star"
        }
      ]
    },
    config = {
      "graphType": "Network",
      "networkLayoutType": "radial",
      "nodeFontColor": "rgb(29,34,43)",
      "nodeScaleFontFactor": 2,
      "showAnimation": True,
      "title": "Radial Network"
    },
    width = 600,
    height = 600
  )
)

using CanvasXpress

canvasxpress(Dict(
  "edges" => [
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene1",
      "id2" => "Gene2",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,152)",
      "id1" => "SNP1",
      "id2" => "PH1",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene2",
      "id2" => "Gene7",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene2",
      "id2" => "Gene8",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene1",
      "id2" => "Gene3",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,152)",
      "id1" => "SNP4",
      "id2" => "PH4",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(102,12,152)",
      "id1" => "PH1",
      "id2" => "PH1a",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(102,12,152)",
      "id1" => "PH1",
      "id2" => "PH1b",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene4",
      "id2" => "SNP3",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene6",
      "id2" => "SNP4",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,152)",
      "id1" => "PH2",
      "id2" => "PH2a",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(102,12,152)",
      "id1" => "PH2",
      "id2" => "PH2b",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene6",
      "id2" => "SNP5",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene7",
      "id2" => "SNP6",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "SNP6",
      "id2" => "SNP7",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene1",
      "id2" => "Gene4",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene1",
      "id2" => "Gene5",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "SNP7",
      "id2" => "Gene6",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(153,12,255)",
      "id1" => "SNP6",
      "id2" => "SNP8",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene3",
      "id2" => "SNP1",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,255)",
      "id1" => "Gene3",
      "id2" => "SNP2",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(153,12,255)",
      "id1" => "SNP2",
      "id2" => "PH2",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(51,12,152)",
      "id1" => "SNP3",
      "id2" => "PH3",
      "type" => "line"
    ),
    Dict(
      "color" => "rgb(102,12,152)",
      "id1" => "PH2b",
      "id2" => "PH2ba",
      "type" => "line"
    )
  ],
  "nodes" => [
    Dict(
      "color" => "rgb(255,0,0)",
      "id" => "Gene1",
      "shape" => "square"
    ),
    Dict(
      "color" => "rgb(255,0,0)",
      "id" => "Gene2",
      "shape" => "square"
    ),
    Dict(
      "color" => "rgb(255,0,0)",
      "id" => "Gene3",
      "shape" => "square"
    ),
    Dict(
      "color" => "rgb(255,0,0)",
      "id" => "Gene4",
      "shape" => "square"
    ),
    Dict(
      "color" => "rgb(255,0,0)",
      "id" => "Gene5",
      "shape" => "square"
    ),
    Dict(
      "color" => "rgb(255,0,0)",
      "id" => "Gene6",
      "shape" => "square"
    ),
    Dict(
      "color" => "rgb(255,0,0)",
      "id" => "Gene7",
      "shape" => "square"
    ),
    Dict(
      "color" => "rgb(255,0,0)",
      "id" => "Gene8",
      "shape" => "square"
    ),
    Dict(
      "color" => "rgb(0,255,0)",
      "id" => "SNP1",
      "shape" => "sphere"
    ),
    Dict(
      "color" => "rgb(0,255,0)",
      "id" => "SNP2",
      "shape" => "sphere"
    ),
    Dict(
      "color" => "rgb(0,255,0)",
      "id" => "SNP3",
      "shape" => "sphere"
    ),
    Dict(
      "color" => "rgb(0,255,0)",
      "id" => "SNP4",
      "shape" => "sphere"
    ),
    Dict(
      "color" => "rgb(0,255,0)",
      "id" => "SNP5",
      "shape" => "sphere"
    ),
    Dict(
      "color" => "rgb(0,255,0)",
      "id" => "SNP6",
      "shape" => "sphere"
    ),
    Dict(
      "color" => "rgb(0,255,0)",
      "id" => "SNP7",
      "shape" => "sphere"
    ),
    Dict(
      "color" => "rgb(0,255,0)",
      "id" => "SNP8",
      "shape" => "sphere"
    ),
    Dict(
      "color" => "rgb(0,255,255)",
      "id" => "PH1",
      "shape" => "star"
    ),
    Dict(
      "color" => "rgb(0,255,255)",
      "id" => "PH1a",
      "parentNode" => "PH1",
      "shape" => "star"
    ),
    Dict(
      "color" => "rgb(0,255,255)",
      "id" => "PH1b",
      "parentNode" => "PH1",
      "shape" => "star"
    ),
    Dict(
      "color" => "rgb(0,255,255)",
      "id" => "PH2",
      "shape" => "star"
    ),
    Dict(
      "color" => "rgb(0,255,255)",
      "id" => "PH2a",
      "parentNode" => "PH2",
      "shape" => "star"
    ),
    Dict(
      "color" => "rgb(0,255,255)",
      "id" => "PH2b",
      "parentNode" => "PH2",
      "shape" => "star"
    ),
    Dict(
      "color" => "rgb(0,255,255)",
      "id" => "PH2ba",
      "parentNode" => "PH2b",
      "shape" => "star"
    ),
    Dict(
      "color" => "rgb(0,255,255)",
      "id" => "PH3",
      "shape" => "star"
    ),
    Dict(
      "color" => "rgb(0,255,255)",
      "id" => "PH4",
      "shape" => "star"
    )
  ]
);
  graphType = "Network",
  networkLayoutType = "radial",
  nodeFontColor = "rgb(29,34,43)",
  nodeScaleFontFactor = 2,
  showAnimation = true,
  title = "Radial Network"
)