Exploring Wikapathways Network with Data Colors

Network graphs are powerful visualizations of relationships within datasets. Nodes represent entities, and edges show connections between them. Applications range from social networks and infrastructure mapping to biological systems and cybersecurity analysis. Understanding network graph properties like centrality and clustering reveals valuable insights. Analyzing network graphs helps identify key players, vulnerabilities, and community structures. Tools and algorithms exist for creating, visualizing, and analyzing these graphs, providing crucial data-driven insights across many fields. From identifying influential figures to optimizing infrastructure, network graphs offer a versatile approach to complex data representation.


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               "nodeName": "datanode",
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               "hideLabel": true,
               "hideTooltip": false,
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               "type": "Anchor",
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               "zorder": 0
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               "color": "rgba(0,0,0,0)",
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               "height": 1,
               "hideLabel": true,
               "hideTooltip": false,
               "id": "cac70",
               "label": "",
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         ]
      }

      // Create the configuration for the graph
      var config = {
         "adjustBezier" : false,
         "calculateLayout" : false,
         "colorNodeBy" : "Exp1",
         "graphType" : "Network",
         "networkFreeze" : true,
         "networkNodesOnTop" : false,
         "preScaleNetwork" : false,
         "showNodeNameThreshold" : 20000,
         "title" : "Apoptosis"
      }

      // Event used to create graph (optional)
      var events = false


      // Call the CanvasXpress function to create the graph
      var cX = new CanvasXpress("canvasId", data, config, events);

      
    </script>

  </body>

</html>
library(canvasXpress)
nodes=read.table("https://www.canvasxpress.org/data/r/cX-wpapoptosis-nodes.txt", header=TRUE, sep="\t", quote="", fill=TRUE, check.names=FALSE, stringsAsFactors=FALSE)
edges=read.table("https://www.canvasxpress.org/data/r/cX-wpapoptosis-edges.txt", header=TRUE, sep="\t", quote="", fill=TRUE, check.names=FALSE, stringsAsFactors=FALSE)
canvasXpress(
  nodeData=nodes,
  edgeData=edges,
  adjustBezier=FALSE,
  calculateLayout=FALSE,
  colorNodeBy="Exp1",
  graphType="Network",
  networkFreeze=TRUE,
  networkNodesOnTop=FALSE,
  preScaleNetwork=FALSE,
  showNodeNameThreshold=20000,
  title="Apoptosis"
)